Gene: Cre12.g496700
Overview
| Common name: | TRX17,TRL3 |
| Defline: | (1 of 4) PTHR10438//PTHR10438:SF255 - THIOREDOXIN // THIOREDOXIN M4, CHLOROPLASTIC; Thioredoxin-like protein |
| Description: | Unusual thioredoxin (not f-type) exhibiting homology with f-type thioredoxins but contains an unusual active site HCKPC (classically thioredoxins contain a WCGPC or WCPPC active site). The N-terminal extension might represent a transit peptide. |
| Synonyms: | TRX17,Cre12.g496700.t1.1,g12651.t1,TRL3 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g496700 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g496700-Venus-3xFLAG
Imaged strain: CSI_LW04F12
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/not pyrenoid depleted
shapes in cytoplasm/a few small puncta|vesicles in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.006031_1 | CLIP2.006031 | intron | 80 | 6.1 |
| CLIP2.006031_2 | CLIP2.006031 | intron | 80 | 6.1 |
| LMJ.RY0402.057910_2 | LMJ.RY0402.057910 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.094936_1 | LMJ.RY0402.094936 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.094936_2 | LMJ.RY0402.094936 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.206618_1 | LMJ.RY0402.206618 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.218092_1 | LMJ.RY0402.218092 | CDS | 73 | 5.5 |
| LMJ.RY0402.226754_1 | LMJ.RY0402.226754 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.241853_1 | LMJ.RY0402.241853 | intron | 73 | 5.5 |
| LMJ.RY0402.251639_1 | LMJ.RY0402.251639 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00085 |
| PANTHER: | PTHR10438 PTHR10438:SF255 |
| KEGG_ec: | EC:1.6.5.4 |
| KEGG_orthology: | |
| KOG: | KOG0907 |
| Gene ontology terms:: | GO:0006662, GO:0015035, GO:0045454 |
| Best arabidopsis TAIR name: | AT3G02730.1 |
| Best arabidopsis TAIR symbol: | ATF1,TRXF1 |
| Best arabidopsis TAIR defline: | thioredoxin F-type 1 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.