Insertion junction: LMJ.RY0402.218092_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.218092
Chromosome:chromosome 12
Location:3418417
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g496700 TRX17,TRL3 (1 of 4) PTHR10438//PTHR10438:SF255 - THIOREDOXIN // THIOREDOXIN M4, CHLOROPLASTIC; Thioredoxin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGTGGTCCCCCGTCAGCTCCAGCAGC
Internal bar code:ACGATCAGACAATTTTGTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1008
LEAP-Seq percent confirming:99.5048
LEAP-Seq n confirming:3617
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGTTCAAGCAAATGGGC
Suggested primer 2:ATTTGACGCTTAAACGACCG