Insertion junction: LMJ.RY0402.206618_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.206618
Chromosome:chromosome 12
Location:3417883
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g496700 TRX17,TRL3 (1 of 4) PTHR10438//PTHR10438:SF255 - THIOREDOXIN // THIOREDOXIN M4, CHLOROPLASTIC; Thioredoxin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGACAAGGAAGAGAGGTCCAGTGGGC
Internal bar code:CTGGATATGTGGCGGCGGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1088
LEAP-Seq percent confirming:96.0535
LEAP-Seq n confirming:9687
LEAP-Seq n nonconfirming:398
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAAGCCATATAGGAACGC
Suggested primer 2:TAGTTGAGACACGCCACGTC