| Common name: | |
| Defline: | (1 of 1) K03130 - transcription initiation factor TFIID subunit 5 (TAF5); Transcription initiation factor |
| Description: | Transcription initiation factor TFIID, subunit TAF5, ChromDB TAFV341; contains WD4 domain. Putative homolog of Saccharomyces cerevisiae TAF5 which is the 9 kDa subunit of TFIID and SAGA complexes. Yeast TAF5 is involved in RNA polymerase II transcripti |
| Synonyms: | g12983.t1 |
| Chromosome: | chromosome 12 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.066532_1 | CLIP2.066532 | intron | 63 | 6.1 |
| CLIP2.069350_2 | CLIP2.069350 | intron | 40 | 6.1 |
| LMJ.RY0402.066396_2 | LMJ.RY0402.066396 | intron | 58 | 5.5 |
| LMJ.RY0402.182443_1 | LMJ.RY0402.182443 | intron | 58 | 5.5 |
| LMJ.RY0402.198063_1 | LMJ.RY0402.198063 | intron | 58 | 5.5 |
| PFAM: | PF00400, PF04494 |
| PANTHER: | PTHR19879 PTHR19879:SF1 |
| KEGG_ec: | |
| KEGG_orthology: | K03130 |
| KOG: | KOG0263 |
| Gene ontology terms:: | GO:0005515, GO:0005634, GO:0006355, GO:0042309, GO:0050825, GO:0050826 |
| Best arabidopsis TAIR name: | AT5G25150 |
| Best arabidopsis TAIR symbol: | TAF5 |
| Best arabidopsis TAIR defline: | TBP-associated factor 5 |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| Paromomycin, screen 3 of 6 ( 71% confidence (FDR = 0.29)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.