Gene: Cre13.g588150

Overview

Common name:VTC2
Defline:GDP-L-galactose phosphorylase; (1 of 1) 2.7.7.69 - GDP-L-galactose phosphorylase
Description:first committed step in vitamin C biosynthesis; mutant shows reduced vitamin C content, and increased 5mC/decreased 5gmC in its DNA, due to impairement of TET-mediated 5mC modifications
Synonyms:Cre13.g588150.t1.1,g14427.t1
Chromosome:chromosome 13

Protein Localization

A plasmid for expressing Cre13.g588150 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre13.g588150-Venus-3xFLAG

No localization data is available in our datasets for this protein.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.023282_1 CLIP2.023282 intron 80 6.1
CLIP2.041729_1 CLIP2.041729 CDS 80 6.1
CLIP2.041729_2 CLIP2.041729 CDS 80 6.1
CLIP2.042229_1 CLIP2.042229 intron 80 6.1
CLIP2.042229_2 CLIP2.042229 intron 80 6.1
CLIP2.058039_1 CLIP2.058039 5'UTR 80 6.1
CLIP2.058692_1 CLIP2.058692 3'UTR 80 6.1
CLIP2.058692_2 CLIP2.058692 3'UTR 80 6.1
CLIP2.059221_1 CLIP2.059221 3'UTR 80 6.1
CLIP2.059221_2 CLIP2.059221 3'UTR 80 6.1
CLIP2.069965_1 CLIP2.069965 3'UTR 80 6.1
CLIP2.069965_2 CLIP2.069965 3'UTR 80 6.1
LMJ.RY0402.058624_1 LMJ.RY0402.058624 CDS 95 5.5
LMJ.RY0402.058624_2 LMJ.RY0402.058624 intron 95 5.5
LMJ.RY0402.066335_1 LMJ.RY0402.066335 intron 95 5.5
LMJ.RY0402.066335_2 LMJ.RY0402.066335 intron 95 5.5
LMJ.RY0402.104564_1 LMJ.RY0402.104564 3'UTR 73 5.5
LMJ.RY0402.128297_1 LMJ.RY0402.128297 3'UTR 58 5.5
LMJ.RY0402.146784_2 LMJ.RY0402.146784 3'UTR 95 5.5
LMJ.RY0402.146784_3 LMJ.RY0402.146784 3'UTR 95 5.5
LMJ.RY0402.152689_1 LMJ.RY0402.152689 3'UTR 73 5.5
LMJ.RY0402.180143_1 LMJ.RY0402.180143 3'UTR 73 5.5
LMJ.RY0402.197209_2 LMJ.RY0402.197209 3'UTR 95 5.5
LMJ.RY0402.197209_3 LMJ.RY0402.197209 3'UTR 95 5.5
LMJ.RY0402.205752_3 LMJ.RY0402.205752 3'UTR 95 5.5
LMJ.RY0402.205752_4 LMJ.RY0402.205752 3'UTR 95 5.5
LMJ.RY0402.215031_1 LMJ.RY0402.215031 3'UTR 73 5.5
LMJ.RY0402.222825_1 LMJ.RY0402.222825 3'UTR 95 5.5
LMJ.RY0402.222825_2 LMJ.RY0402.222825 3'UTR 95 5.5
LMJ.RY0402.238441_1 LMJ.RY0402.238441 3'UTR 73 5.5
LMJ.RY0402.240165_1 LMJ.RY0402.240165 3'UTR 73 5.5
LMJ.RY0402.244827_1 LMJ.RY0402.244827 3'UTR 73 5.5
LMJ.RY0402.248367_2 LMJ.RY0402.248367 3'UTR 73 5.5

Gene Annotations

PFAM:
PANTHER: PTHR20884 PTHR20884:SF8
KEGG_ec:EC:2.7.7.69
KEGG_orthology:K14190
KOG:KOG2720
Gene ontology terms::GO:0003824, GO:0080048
Best arabidopsis TAIR name:AT5G55120
Best arabidopsis TAIR symbol:VTC5
Best arabidopsis TAIR defline:galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.