Gene: Cre13.g608000
Overview
| Common name: | CPLD52 |
| Defline: | Conserved in the Plant Lineage and Diatoms; (1 of 1) PTHR10366//PTHR10366:SF389 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED |
| Description: | Conserved expressed protein; may the target of a miRNA (CrsRNA2107) that targets cleavage the near end of the CDS (PMID: 17538623) |
| Synonyms: | Cre13.g608000.t1.1,g14656.t1 |
| Chromosome: | chromosome 13 |
Protein Localization
A plasmid for expressing Cre13.g608000 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre13.g608000-Venus-3xFLAG
Imaged strain: CSI_LW10G1
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
nucleus/nucleolus
(with enriched signal in nucleoplasm)
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.003764_2 | CLIP2.003764 | intron | 63 | 6.1 |
| LMJ.RY0402.202811_1 | LMJ.RY0402.202811 | intron | 95 | 5.5 |
| LMJ.RY0402.202811_2 | LMJ.RY0402.202811 | intron | 95 | 5.5 |
| LMJ.RY0402.213475_1 | LMJ.RY0402.213475 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | |
| PANTHER: | PTHR10366 PTHR10366:SF389 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT2G39080 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | NAD(P)-binding Rossmann-fold superfamily protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.