Gene: Cre14.g630000
Overview
| Common name: | KIR2 |
| Defline: | putative ketoacid isomerase-like protein; (1 of 7) PF12680 - SnoaL-like domain (SnoaL_2) |
| Description: | Related to a series of bacterial genes among which is a putative ketosteroid isomerase-related protein of Ralstonia; however, it is impossible to find a similarity with the well-characterized delta5-3-ketosteroid isomerase of Pseudomonas putida or Comamonas testosteroni, so this may be a case of erroneous annotation in Ralstonia that spread into COG; is probably targeted to the thylakoid lumen (based on alignment and RR motif), like the related gene KIR2 |
| Synonyms: | g15172.t1,Cre14.g630000.t1.1,KIR2 |
| Chromosome: | chromosome 14 |
Protein Localization
A plasmid for expressing Cre14.g630000 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre14.g630000-Venus-3xFLAG
Imaged strain: CSI_LW04F11
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/not pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001920_1 | CLIP2.001920 | CDS | 80 | 6.1 |
| CLIP2.004317_1 | CLIP2.004317 | outside_mRNA | 80 | 6.1 |
| CLIP2.004498_1 | CLIP2.004498 | CDS | 80 | 6.1 |
| CLIP2.004498_2 | CLIP2.004498 | CDS | 80 | 6.1 |
| CLIP2.005431_1 | CLIP2.005431 | CDS | 80 | 6.1 |
| CLIP2.007190_2 | CLIP2.007190 | intron | 63 | 6.1 |
| LMJ.RY0402.058753_1 | LMJ.RY0402.058753 | intron | 73 | 5.5 |
| LMJ.RY0402.093811_2 | LMJ.RY0402.093811 | intron | 58 | 5.5 |
| LMJ.RY0402.147484_1 | LMJ.RY0402.147484 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.167282_1 | LMJ.RY0402.167282 | intron | 58 | 5.5 |
| LMJ.RY0402.210871_2 | LMJ.RY0402.210871 | CDS | 73 | 5.5 |
| LMJ.RY0402.220739_1 | LMJ.RY0402.220739 | intron | 95 | 5.5 |
| LMJ.RY0402.220739_2 | LMJ.RY0402.220739 | intron | 95 | 5.5 |
Gene Annotations
| PFAM: | PF12680 |
| PANTHER: | |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.