Gene: Cre16.g665250
Overview
| Common name: | APE1,TEF6 |
| Defline: | (1 of 1) PF11016 - Protein of unknown function (DUF2854) (DUF2854); Acclimation of photosynthesis to environment |
| Description: | Homolog of Arabidopsis APE1 (Acclimation of Photosynthesis to Environment) that is required for acclimation of photosynthesis to various light intensity; TEF6, found in thylakoid proteome by Hippler and co-workers; Chlamydomonas mutant shows light-sensitivity in low CO2, |
| Synonyms: | TEF6,g16056.t1,Cre16.g665250.t1.1 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g665250 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g665250-Venus-3xFLAG
Imaged strain: CSI_LW02H9
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002463_1 | CLIP2.002463 | 3'UTR | 80 | 6.1 |
| CLIP2.003911_1 | CLIP2.003911 | intron | 80 | 6.1 |
| CLIP2.003911_2 | CLIP2.003911 | intron | 80 | 6.1 |
| CLIP2.006665_5 | CLIP2.006665 | CDS | 80 | 6.1 |
| CLIP2.006665_6 | CLIP2.006665 | CDS | 80 | 6.1 |
| LMJ.RY0402.039504_1 | LMJ.RY0402.039504 | intron | 73 | 5.5 |
| LMJ.RY0402.050062_1 | LMJ.RY0402.050062 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.050062_2 | LMJ.RY0402.050062 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.135971_1 | LMJ.RY0402.135971 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF11016 |
| PANTHER: | PTHR35551 PTHR35551:SF1 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT5G38660 |
| Best arabidopsis TAIR symbol: | APE1 |
| Best arabidopsis TAIR defline: | acclimation of photosynthesis to environment |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.