Insertion junction: CLIP2.002463_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002463
Chromosome:chromosome 16
Location:3156443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665200 5'UTR
Cre16.g665250 APE1,TEF6 (1 of 1) PF11016 - Protein of unknown function (DUF2854) (DUF2854); Acclimation of photosynthesis to environment 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCCGCACCCCGGCGCCCCCGGGTTGCACACAGTAGCACACATGCATT
Internal bar code:AAAAAGTTCAGATCGTGGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1598
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTCCAGCAGACCACCAG
Suggested primer 2:GAACGAGTTCCAGCCCAAGA