Gene: Cre16.g675550
Overview
| Common name: | FKB16-2,FKB5,FKB16B |
| Defline: | (1 of 2) PTHR10516//PTHR10516:SF281 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // 12 KDA FK506-BINDING PROTEIN; Peptidyl-prolyl cis-trans isomerase, FKBP-type |
| Description: | FKBP-type peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPiase) (Rotamase) (Immunophilin), orthologous to At5g45680; isoform a of gene FKB16-2, probably directed to thylakoid lumen (TP length 26, RR motif); other splicing isoforms possibly directed to stroma or mitochondrion; linked to FKB16-5 |
| Synonyms: | Cre16.g675550.t1.1,FKB16-2,FKB5,g16607.t2 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g675550 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g675550-Venus-3xFLAG
Imaged strain: CSI_LW01G1
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/not pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.005658_1 | CLIP2.005658 | CDS | 80 | 6.1 |
| CLIP2.007693_1 | CLIP2.007693 | 5'UTR | 80 | 6.1 |
| CLIP2.007693_2 | CLIP2.007693 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.196370_1 | LMJ.RY0402.196370 | intron | 95 | 5.5 |
| LMJ.RY0402.196370_2 | LMJ.RY0402.196370 | intron | 95 | 5.5 |
| LMJ.RY0402.208586_2 | LMJ.RY0402.208586 | intron | 95 | 5.5 |
| LMJ.RY0402.208586_3 | LMJ.RY0402.208586 | intron | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00254 |
| PANTHER: | PTHR10516 PTHR10516:SF281 |
| KEGG_ec: | EC:5.2.1.8 |
| KEGG_orthology: | K01802 |
| KOG: | KOG0544 |
| Gene ontology terms:: | GO:0006457 |
| Best arabidopsis TAIR name: | AT5G45680 |
| Best arabidopsis TAIR symbol: | ATFKBP13,FKBP13 |
| Best arabidopsis TAIR defline: | FK506-binding protein 13 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.