| Common name: | NSG12,UAP56 |
| Defline: | Exon junction complex component, UAP56 DEAD/DEAH box helicase ho |
| Description: | Putative DEAD box protein UAP56, spliceosome-associated, part of EJC, involved in transport of mRNA out of nucleus. Identified by Abe et al. 2004 [PMID: 15459796] as NSG12, a gene expressed during nitrogen-starved gametogenesis. Previously annotated as U |
| Synonyms: | g17399.t1,Cre17.g719000.t1.1,NSG12,UAP56 |
| Chromosome: | chromosome 17 |
We did not create a plasmid for this gene.
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre03.g189500 | Cre17.g719000 | NSG12,UAP56 | Wang et al. 2023 |
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| LMJ.RY0402.046234_1 | LMJ.RY0402.046234 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.046234_2 | LMJ.RY0402.046234 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.197728_2 | LMJ.RY0402.197728 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.246648_1 | LMJ.RY0402.246648 | 3'UTR | 73 | 5.5 |
| PFAM: | PF00271, PF00270 |
| PANTHER: | PTHR24031:SF5 PTHR24031 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG0329 |
| Gene ontology terms:: | GO:0003676, GO:0004386, GO:0005524, GO:0008026 |
| Best arabidopsis TAIR name: | AT5G11200.2 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | DEAD/DEAH box RNA helicase family protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.