Gene: Cre17.g736250

Overview

Common name:
Defline:
Description:
Synonyms:g17808.t1,Cre17.g736250.t1.1
Chromosome:chromosome 17

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
LMJ.RY0402.053092_1 LMJ.RY0402.053092 intron 73 5.5
LMJ.RY0402.121821_1 LMJ.RY0402.121821 5'UTR_intron 95 5.5
LMJ.RY0402.121821_2 LMJ.RY0402.121821 5'UTR_intron 95 5.5
LMJ.RY0402.143985_1 LMJ.RY0402.143985 3'UTR 73 5.5
LMJ.RY0402.175846_2 LMJ.RY0402.175846 intron 95 5.5
LMJ.RY0402.175846_3 LMJ.RY0402.175846 intron 95 5.5
LMJ.RY0402.178196_1 LMJ.RY0402.178196 intron 73 5.5
LMJ.RY0402.194592_1 LMJ.RY0402.194592 intron 95 5.5
LMJ.RY0402.194592_2 LMJ.RY0402.194592 intron 95 5.5
LMJ.RY0402.199756_1 LMJ.RY0402.199756 5'UTR_intron 73 5.5
LMJ.RY0402.205295_1 LMJ.RY0402.205295 intron 58 5.5
LMJ.RY0402.212843_1 LMJ.RY0402.212843 intron 73 5.5
LMJ.RY0402.237407_2 LMJ.RY0402.237407 intron 73 5.5
LMJ.RY0402.239551_2 LMJ.RY0402.239551 intron 58 5.5
LMJ.RY0402.239551_3 LMJ.RY0402.239551 intron 73 5.5

Gene Annotations

PFAM:PF00069
PANTHER: PTHR23257:SF310 PTHR23257
KEGG_ec:
KEGG_orthology:
KOG:KOG0198
Gene ontology terms::GO:0004672, GO:0005524, GO:0006468
Best arabidopsis TAIR name:AT5G49470.3
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:PAS domain-containing protein tyrosine kinase family protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 3 of 6 ( 80% confidence (FDR = 0.2))
Paromomycin, screen 4 of 6 ( 93% confidence (FDR = 0.07))
Paromomycin, screen 5 of 6 ( 74% confidence (FDR = 0.26))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.