Insertion junction: CLIP2.000001_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000001
Chromosome:chromosome 10
Location:2718355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g437829 CIA6,CGL89 (1 of 1) PTHR13271//PTHR13271:SF19 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // PROTEIN SET DOMAIN GROUP 40; methyltransferase domain protein involved in pyrenoid biogenesis CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGCTGCATGCAGGGCCCGTTTGTATGTTACCCGCCACTGCAGCGCCAG
Internal bar code:TTGGCGGCGTCATTGTGATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3887
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTGGTGATGGCAGTAGC
Suggested primer 2:CGCGCTCCTATGTCATTCCT