| Common name: | CIA6,CGL89 |
| Defline: | (1 of 1) PTHR13271//PTHR13271:SF19 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // PROTEIN SET DOMAIN GROUP 40; methyltransferase domain protein involved in pyrenoid biogenesis |
| Description: | Conserved in the Green Lineage; contains SET domain methyltransferase domain, but no activity was demonstrated; mutant shows impaired growth under very low CO2; lower expression of CCP1, LCIB and CAH4 and a disorganized pyrenoid |
| Synonyms: | g10786.t1,Cre10.g437829.t1.1,CGL89 |
| Chromosome: | chromosome 10 |
A plasmid for expressing Cre10.g437829 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre10.g437829-Venus-3xFLAG
No localization data is available in our datasets for this protein.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.000001_1 | CLIP2.000001 | CDS | 80 | 6.1 |
| CLIP2.000001_2 | CLIP2.000001 | CDS | 80 | 6.1 |
| CLIP2.000211_3 | CLIP2.000211 | 3'UTR | 80 | 6.1 |
| CLIP2.000211_4 | CLIP2.000211 | 3'UTR | 80 | 6.1 |
| CLIP2.000398_1 | CLIP2.000398 | 3'UTR | 80 | 6.1 |
| CLIP2.000811_1 | CLIP2.000811 | CDS | 80 | 6.1 |
| CLIP2.000811_2 | CLIP2.000811 | CDS | 80 | 6.1 |
| LMJ.RY0402.193500_1 | LMJ.RY0402.193500 | intron | 95 | 5.5 |
| LMJ.RY0402.193500_2 | LMJ.RY0402.193500 | intron | 95 | 5.5 |
| LMJ.RY0402.218540_1 | LMJ.RY0402.218540 | 3'UTR | 73 | 5.5 |
| PFAM: | PF09273 |
| PANTHER: | PTHR13271 PTHR13271:SF19 |
| KEGG_ec: | EC:2.1.1.43 |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT5G17240 |
| Best arabidopsis TAIR symbol: | SDG40 |
| Best arabidopsis TAIR defline: | SET domain group 40 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.