Insertion junction: LMJ.RY0402.218540_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.218540
Chromosome:chromosome 10
Location:2674974
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g437829 CIA6,CGL89 (1 of 1) PTHR13271//PTHR13271:SF19 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // PROTEIN SET DOMAIN GROUP 40; methyltransferase domain protein involved in pyrenoid biogenesis 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAAGGCATGAGAGAGAACCGCTGAGTC
Internal bar code:ATCGACCGTGTACAGCCGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:492
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:300
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTTGAGGACCTGCCTAC
Suggested primer 2:ATTGCAGCAAAGCCAGTTCT