Insertion junction: CLIP2.000012_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000012
Chromosome:chromosome 3
Location:4620059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176833 NAP1,NAP,DII5 (1 of 7) PF00022 - Actin (Actin); Novel actin protein 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCAGTAAACGTGCGGATGGATGGGTCGGCGGTCAAAGCGAGTCCCAG
Internal bar code:GATTGAAGTATCACTCAGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:733
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAAGTTGAAGTCGAGGGC
Suggested primer 2:TAGTCCAGAGCCACGTACGA