Insertion junction: CLIP2.000017_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000017
Chromosome:chromosome 10
Location:2569956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436550 LCI5,EPYC1 Essential pyrenoid component 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGTGTACTGACACGTTTGCTTGCCGTTTCCCCTGGTGCCCCTTCGCC
Internal bar code:TGTCCCAGGGTAGTTACTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:333
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGCTTCCAGTTGGAGG
Suggested primer 2:CTCCATCTGTAGCGTCGACC