Insertion junction: CLIP2.000027_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000027
Chromosome:chromosome 9
Location:3202654
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394621 (1 of 8) IPR002044//IPR013784 - Carbohydrate binding module family 20 // Carbohydrate-binding-like fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGGATGGCGTGTTGCGTGCGTGGCGTGGGGTGTGTGTGTAGGAAGCG
Internal bar code:ATGGCTAGGTCACTGCGATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:272
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGCTCACACACTCACTC
Suggested primer 2:GTGTGTCACCGACCATCCTT