Gene: Cre09.g394621

Overview

Common name:
Defline:	(1 of 8) IPR002044//IPR013784 - Carbohydrate binding module family 20 // Carbohydrate-binding-like fold
Description:
Synonyms:	Cre02.g130900.t1.1,g9787.t1
Chromosome:	chromosome 9

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

Bait ID	Bait Name	Prey ID	Prey Name	Reference
Cre02.g120100	RBCS1	Cre09.g394621		Mackinder et al. 2017
Cre02.g120150	RBCS2	Cre09.g394621		Mackinder et al. 2017
Cre10.g436550	LCI5,EPYC1	Cre09.g394621		Mackinder et al. 2017

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.000027_1	CLIP2.000027	intron	80	6.1
CLIP2.000027_2	CLIP2.000027	intron	80	6.1
CLIP2.000090_1	CLIP2.000090	intron	80	6.1
CLIP2.000090_2	CLIP2.000090	intron	80	6.1
CLIP2.000469_1	CLIP2.000469	intron	80	6.1
CLIP2.000469_2	CLIP2.000469	intron	80	6.1
CLIP2.000572_1	CLIP2.000572	CDS	80	6.1
CLIP2.000572_2	CLIP2.000572	CDS	80	6.1
CLIP2.000655_1	CLIP2.000655	intron	80	6.1
CLIP2.000655_2	CLIP2.000655	intron	80	6.1
CLIP2.074577_1	CLIP2.074577	CDS	40	6.1
LMJ.RY0402.062337_1	LMJ.RY0402.062337	intron	95	5.5
LMJ.RY0402.062337_2	LMJ.RY0402.062337	intron	95	5.5
LMJ.RY0402.067980_1	LMJ.RY0402.067980	intron	73	5.5
LMJ.RY0402.071951_1	LMJ.RY0402.071951	intron	73	5.5
LMJ.RY0402.088597_1	LMJ.RY0402.088597	intron	73	5.5
LMJ.RY0402.108270_4	LMJ.RY0402.108270	3'UTR	95	5.5
LMJ.RY0402.108270_5	LMJ.RY0402.108270	3'UTR	95	5.5
LMJ.RY0402.189225_1	LMJ.RY0402.189225	3'UTR	95	5.5
LMJ.RY0402.189225_2	LMJ.RY0402.189225	3'UTR	95	5.5

Gene Annotations

PFAM:	PF00686
PANTHER:	PTHR18937
KEGG_ec:
KEGG_orthology:
KOG:	KOG0978
Gene ontology terms::	GO:0030246, GO:2001070
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

LAT002C07, screen 1 of 1 ( 81% confidence (FDR = 0.19))

Photosynthesis, screen 3 of 5 ( 97% confidence (FDR = 0.021))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.