Insertion junction: LMJ.RY0402.108270_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.108270
Chromosome:chromosome 9
Location:4283565
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g394621 (1 of 8) IPR002044//IPR013784 - Carbohydrate binding module family 20 // Carbohydrate-binding-like fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTAACCTCCCTGGGCCCAAACACCCTGC
Internal bar code:GAGAGTCAGTACGGACGTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:528
LEAP-Seq percent confirming:98.8997
LEAP-Seq n confirming:5393
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACTACTGCAGCTGCCACAT
Suggested primer 2:TACTGCATGGTTGTGGTCGT