Insertion junction: CLIP2.000070_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000070
Chromosome:chromosome 10
Location:3495171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444700 SBE3,SBE2b (1 of 3) 2.4.1.18 - 1,4-alpha-glucan branching enzyme / Glycogen branching enzyme; Starch Branching Enzyme 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACGCACCTTGGCGCCGGGTGCCCACTCGCGGTACCAGATACCGGTCT
Internal bar code:AATAAGTCCATGTGACGAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1929
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGACCTATCTCGCCGAT
Suggested primer 2:CCAAGTGCCGTACTGGTTCT