Insertion junction: CLIP2.000104_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000104
Chromosome:chromosome 6
Location:5990147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g290400 HDA5 (1 of 1) PTHR10625:SF104 - HISTONE DEACETYLASE 6; RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTAACACTGGAATGGCGTGGAGTAGAGACTTTGACTGTGGAAACCACA
Internal bar code:TAGTAACCGGCACGACTATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3697
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTACATGTGCGTGTGGGT
Suggested primer 2:GCCCCCTTACCTCAAGAACC