Insertion junction: CLIP2.000131_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000131
Chromosome:chromosome 12
Location:4734484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522950 MIND1 Chloroplast septum site-determining protein; (1 of 1) K03609 - septum site-determining protein MinD (minD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCATGTCGTTCTGCGCACGGGACCGGGTGAACAGGGCAGGGCGGTGAA
Internal bar code:TGCACCGGGGACATGAGTGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3656
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTGACGTCGGCTTCATC
Suggested primer 2:ACGTGAAAGCAGGTCGTCAT