Insertion junction: CLIP2.000149_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000149
Chromosome:chromosome 12
Location:8297037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551200 (1 of 5) 3.2.1.1 - Alpha-amylase / Glycogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAACAGTATCGCCGCCGGCTGAAACACGCAAGAATGCAACTGAGCTG
Internal bar code:AGGACCCAGATCCTGCTCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4255
LEAP-Seq percent confirming:65.5738
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACCCGATGCAGTACGTC
Suggested primer 2:ACCGTATGCCGACAAGTTGT