Gene: Cre12.g551200

Overview

Common name:
Defline:(1 of 5) 3.2.1.1 - Alpha-amylase / Glycogenase
Description:
Synonyms:g13521.t1,Cre12.g551200.t1.1
Chromosome:chromosome 12

Protein Localization

A plasmid for expressing Cre12.g551200 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g551200-Venus-3xFLAG

Imaged strain: CSI_LW06G4

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.

Classification(s):

chloroplast/homogeneous/pyrenoid depleted

If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.

VenusChlorophyllBright fieldMerged

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.000149_1 CLIP2.000149 intron 80 6.1
CLIP2.000149_2 CLIP2.000149 intron 80 6.1
CLIP2.000517_3 CLIP2.000517 intron 80 6.1
CLIP2.000517_4 CLIP2.000517 intron 80 6.1
CLIP2.000718_1 CLIP2.000718 intron 80 6.1
CLIP2.000718_2 CLIP2.000718 intron 80 6.1
CLIP2.000780_1 CLIP2.000780 intron 80 6.1
CLIP2.000780_2 CLIP2.000780 intron 80 6.1
CLIP2.001058_1 CLIP2.001058 intron 80 6.1
CLIP2.001058_2 CLIP2.001058 intron 80 6.1
LMJ.RY0402.050066_2 LMJ.RY0402.050066 intron 73 5.5
LMJ.RY0402.070143_1 LMJ.RY0402.070143 CDS 58 5.5
LMJ.RY0402.093428_1 LMJ.RY0402.093428 intron 58 5.5
LMJ.RY0402.150724_1 LMJ.RY0402.150724 3'UTR 73 5.5
LMJ.RY0402.161450_2 LMJ.RY0402.161450 intron 73 5.5
LMJ.RY0402.161450_3 LMJ.RY0402.161450 CDS 58 5.5
LMJ.RY0402.175982_1 LMJ.RY0402.175982 3'UTR 73 5.5
LMJ.RY0402.178537_1 LMJ.RY0402.178537 intron 73 5.5
LMJ.RY0402.193348_5 LMJ.RY0402.193348 3'UTR 95 5.5
LMJ.RY0402.193348_6 LMJ.RY0402.193348 3'UTR 95 5.5
LMJ.RY0402.246642_1 LMJ.RY0402.246642 CDS 73 5.5
LMJ.RY0402.252565_1 LMJ.RY0402.252565 intron 58 5.5
LMJ.RY0402.253005_1 LMJ.RY0402.253005 3'UTR 73 5.5
LMJ.SG0182.014141_1 LMJ.SG0182.014141 intron 75 5.3

Gene Annotations

PFAM:PF00686
PANTHER: PTHR15048 PTHR15048:SF0
KEGG_ec:EC:3.2.1.1
KEGG_orthology:
KOG:
Gene ontology terms::GO:0030246, GO:2001070
Best arabidopsis TAIR name:AT5G01260.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:Carbohydrate-binding-like fold
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

LAT027A05, screen 1 of 1 ( 73% confidence (FDR = 0.27))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.