Insertion junction: LMJ.RY0402.193348_6

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.193348
Chromosome:chromosome 12
Location:8150367
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g551200 (1 of 5) 3.2.1.1 - Alpha-amylase / Glycogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGCGCTTCTGGCTATGCTGCTTACCTT
Internal bar code:ATCATCGACCCTTTTTGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:640
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:582
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAATACGTGTTCTCCGTT
Suggested primer 2:TGTTTTATCCCACGTGCAAA