Insertion junction: CLIP2.000780_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000780
Chromosome:chromosome 12
Location:8297242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551200 (1 of 5) 3.2.1.1 - Alpha-amylase / Glycogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAACCGGTCACGGACACGATAGAATATAGAATACTCTGCACCCCATGCC
Internal bar code:TAACACCCAGAGTCGTTCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1004
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACCCGATGCAGTACGTC
Suggested primer 2:ACCGTATGCCGACAAGTTGT