Insertion junction: CLIP2.000718_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000718
Chromosome:chromosome 12
Location:8296064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551200 (1 of 5) 3.2.1.1 - Alpha-amylase / Glycogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTGAAGCAGGGCCAGCCGACGTCGATTAGCGCCCAGCCGCGTGCTCT
Internal bar code:GATGTGTTCGCCAGTCACACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:768
LEAP-Seq percent confirming:5.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTACTGCATCGGGTAGG
Suggested primer 2:AGCAGCGTCCAGTCGATATG