Insertion junction: CLIP2.000149_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000149
Chromosome:chromosome 13
Location:2514595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580000 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTCCACTATTGTGATGGGCGTTGCTGCCCTGGCCTTCTGCACCTGGT
Internal bar code:ATGCAAAAGTTGGTCGTTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAGGCCAAGTTCACAGC
Suggested primer 2:CGTTTACAGCATCCTTCGCG