Gene: Cre13.g580000 (Genome version: v5.5)

Overview

Common name:
Defline:
Description:
Synonyms:g14250.t1, g14250.t2
Chromosome:chromosome_13

Protein Localization

A plasmid for expressing Cre13.g580000 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre13.g580000-Venus-3xFLAG

No localization data is available in our datasets for this protein.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Orientation Insertion Junction Feature Confidence (%)
LMJ.RY0402.041595_1 LMJ.RY0402.041595 sense CDS 95
LMJ.RY0402.041595_2 LMJ.RY0402.041595 sense CDS 95
LMJ.RY0402.041695_1 LMJ.RY0402.041695 antisense 5'UTR_intron 95
LMJ.RY0402.041695_2 LMJ.RY0402.041695 antisense 5'UTR_intron 95
LMJ.RY0402.045102_1 LMJ.RY0402.045102 antisense 3'UTR 73
LMJ.RY0402.048642_1 LMJ.RY0402.048642 antisense 3'UTR|outside_mRNA 95
LMJ.RY0402.049765_1 LMJ.RY0402.049765 sense CDS 95
LMJ.RY0402.049765_2 LMJ.RY0402.049765 sense CDS 95
LMJ.RY0402.056787_1 LMJ.RY0402.056787 sense 5'UTR_intron 95
LMJ.RY0402.056787_2 LMJ.RY0402.056787 sense CDS 95
LMJ.RY0402.059602_3 LMJ.RY0402.059602 sense 5'UTR 95
LMJ.RY0402.059602_4 LMJ.RY0402.059602 antisense 5'UTR 95
LMJ.RY0402.062341_1 LMJ.RY0402.062341 antisense intron 95
LMJ.RY0402.062341_2 LMJ.RY0402.062341 antisense intron 95
LMJ.RY0402.064983_1 LMJ.RY0402.064983 sense 5'UTR_intron 95
LMJ.RY0402.064983_2 LMJ.RY0402.064983 sense 5'UTR_intron 95
LMJ.RY0402.076721_2 LMJ.RY0402.076721 antisense 5'UTR 73
LMJ.RY0402.082197_1 LMJ.RY0402.082197 sense 5'UTR_intron 95
LMJ.RY0402.082197_2 LMJ.RY0402.082197 sense 5'UTR_intron 95
LMJ.RY0402.095232_1 LMJ.RY0402.095232 sense 5'UTR_intron 73
LMJ.RY0402.096544_2 LMJ.RY0402.096544 sense intron 95
LMJ.RY0402.096544_3 LMJ.RY0402.096544 sense CDS 95
LMJ.RY0402.103999_2 LMJ.RY0402.103999 antisense 5'UTR_intron 73
LMJ.RY0402.105616_1 LMJ.RY0402.105616 sense intron 95
LMJ.RY0402.105616_2 LMJ.RY0402.105616 sense 3'UTR 95
LMJ.RY0402.112048_1 LMJ.RY0402.112048 sense 5'UTR_intron 95
LMJ.RY0402.112048_2 LMJ.RY0402.112048 sense 5'UTR_intron 95
LMJ.RY0402.112275_3 LMJ.RY0402.112275 antisense 3'UTR 95
LMJ.RY0402.112275_4 LMJ.RY0402.112275 antisense 3'UTR|outside_mRNA 95
LMJ.RY0402.133761_1 LMJ.RY0402.133761 antisense 3'UTR|outside_mRNA 95
LMJ.RY0402.133761_2 LMJ.RY0402.133761 antisense 3'UTR|outside_mRNA 95
LMJ.RY0402.138231_2 LMJ.RY0402.138231 antisense 5'UTR 95
LMJ.RY0402.142911_5 LMJ.RY0402.142911 sense intron 73
LMJ.RY0402.145208_1 LMJ.RY0402.145208 sense intron 95
LMJ.RY0402.145208_2 LMJ.RY0402.145208 sense intron 95
LMJ.RY0402.147082_1 LMJ.RY0402.147082 antisense 3'UTR|outside_mRNA 95
LMJ.RY0402.147082_2 LMJ.RY0402.147082 antisense 3'UTR|outside_mRNA 95
LMJ.RY0402.147403_1 LMJ.RY0402.147403 sense intron 58
LMJ.RY0402.159249_1 LMJ.RY0402.159249 antisense CDS 95
LMJ.RY0402.159249_2 LMJ.RY0402.159249 antisense CDS 95
LMJ.RY0402.159249_3 LMJ.RY0402.159249 antisense CDS 95
LMJ.RY0402.168344_2 LMJ.RY0402.168344 antisense CDS 73
LMJ.RY0402.174467_1 LMJ.RY0402.174467 sense 5'UTR 95
LMJ.RY0402.174467_2 LMJ.RY0402.174467 sense 5'UTR 95
LMJ.RY0402.174689_1 LMJ.RY0402.174689 sense 5'UTR_intron 95
LMJ.RY0402.174689_2 LMJ.RY0402.174689 sense 5'UTR_intron 95
LMJ.RY0402.175237_1 LMJ.RY0402.175237 sense CDS 58
LMJ.RY0402.177396_2 LMJ.RY0402.177396 sense intron 73
LMJ.RY0402.180543_2 LMJ.RY0402.180543 sense 5'UTR_intron 73
LMJ.RY0402.184725_3 LMJ.RY0402.184725 sense 5'UTR_intron 73
LMJ.RY0402.191680_3 LMJ.RY0402.191680 sense intron 95
LMJ.RY0402.191680_4 LMJ.RY0402.191680 sense intron 95
LMJ.RY0402.212523_1 LMJ.RY0402.212523 antisense intron 95
LMJ.RY0402.212523_2 LMJ.RY0402.212523 antisense intron 95
LMJ.RY0402.216986_2 LMJ.RY0402.216986 sense 3'UTR 73
LMJ.RY0402.218220_2 LMJ.RY0402.218220 antisense 3'UTR 73
LMJ.RY0402.234693_1 LMJ.RY0402.234693 sense CDS 58
LMJ.RY0402.235208_1 LMJ.RY0402.235208 antisense 5'UTR_intron 73
LMJ.RY0402.237401_3 LMJ.RY0402.237401 sense intron 73
LMJ.RY0402.256161_2 LMJ.RY0402.256161 antisense intron 95
LMJ.RY0402.256161_3 LMJ.RY0402.256161 sense intron 95
LMJ.RY0402.256393_1 LMJ.RY0402.256393 sense 5'UTR_intron 73
LMJ.RY0402.256662_1 LMJ.RY0402.256662 antisense 3'UTR|outside_mRNA 95
LMJ.RY0402.256662_2 LMJ.RY0402.256662 antisense 3'UTR|outside_mRNA 95

Gene Annotations

PFAM:
PANTHER:
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 3 of 6 ( 80% confidence (FDR = 0.2))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.

Gene: Cre13.g580000 (Genome version: v5.3)

Overview

Common name:
Defline:
Description:
Synonyms:g14250
Chromosome:chromosome_13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Orientation Insertion Junction Feature Confidence (%)
LMJ.SG0182.008946_1 LMJ.SG0182.008946 sense MULTIPLE_SPLICE_VARIANTS 75
LMJ.SG0182.019024_1 LMJ.SG0182.019024 sense MULTIPLE_SPLICE_VARIANTS 75
LMJ.SG0182.019413_1 LMJ.SG0182.019413 sense MULTIPLE_SPLICE_VARIANTS 75
LMJ.SG0182.019628_1 LMJ.SG0182.019628 sense MULTIPLE_SPLICE_VARIANTS 75

Gene Annotations

PFAM:
PANTHER:
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.