Gene: Cre13.g580000

Overview

Common name:
Defline:
Description:
Synonyms:g14250.t2
Chromosome:chromosome 13

Protein Localization

A plasmid for expressing Cre13.g580000 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre13.g580000-Venus-3xFLAG

No localization data is available in our datasets for this protein.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.000149_3 CLIP2.000149 5'UTR_intron 80 6.1
CLIP2.000149_4 CLIP2.000149 5'UTR_intron 80 6.1
CLIP2.011079_1 CLIP2.011079 intron 80 6.1
CLIP2.016611_1 CLIP2.016611 CDS 80 6.1
CLIP2.016611_2 CLIP2.016611 CDS 80 6.1
CLIP2.018638_1 CLIP2.018638 CDS 80 6.1
CLIP2.018638_2 CLIP2.018638 CDS 80 6.1
CLIP2.019934_3 CLIP2.019934 5'UTR_intron 80 6.1
CLIP2.019934_4 CLIP2.019934 5'UTR_intron 80 6.1
CLIP2.020851_3 CLIP2.020851 5'UTR 80 6.1
CLIP2.028351_3 CLIP2.028351 3'UTR 80 6.1
CLIP2.028351_4 CLIP2.028351 3'UTR 80 6.1
CLIP2.033574_1 CLIP2.033574 CDS 80 6.1
CLIP2.033574_2 CLIP2.033574 CDS 80 6.1
CLIP2.035665_2 CLIP2.035665 intron 80 6.1
CLIP2.035665_3 CLIP2.035665 intron 80 6.1
CLIP2.035910_1 CLIP2.035910 CDS 80 6.1
CLIP2.035910_2 CLIP2.035910 CDS 80 6.1
CLIP2.036606_1 CLIP2.036606 intron 80 6.1
CLIP2.036835_2 CLIP2.036835 intron 80 6.1
CLIP2.037747_3 CLIP2.037747 intron 80 6.1
CLIP2.037747_4 CLIP2.037747 intron 80 6.1
CLIP2.038971_3 CLIP2.038971 CDS 80 6.1
CLIP2.038971_4 CLIP2.038971 CDS 80 6.1
CLIP2.039816_1 CLIP2.039816 CDS 80 6.1
CLIP2.039816_2 CLIP2.039816 CDS 80 6.1
CLIP2.044065_3 CLIP2.044065 intron 80 6.1
CLIP2.044065_4 CLIP2.044065 intron 80 6.1
CLIP2.045463_3 CLIP2.045463 intron 80 6.1
CLIP2.046061_2 CLIP2.046061 intron 80 6.1
CLIP2.046061_3 CLIP2.046061 intron 80 6.1
CLIP2.049002_2 CLIP2.049002 5'UTR_intron 80 6.1
CLIP2.049002_3 CLIP2.049002 5'UTR_intron 80 6.1
CLIP2.050584_4 CLIP2.050584 CDS 80 6.1
CLIP2.050584_5 CLIP2.050584 CDS 80 6.1
CLIP2.050911_3 CLIP2.050911 5'UTR 80 6.1
CLIP2.059739_2 CLIP2.059739 intron 80 6.1
CLIP2.062318_3 CLIP2.062318 5'UTR 63 6.1
CLIP2.068308_3 CLIP2.068308 intron 80 6.1
CLIP2.068308_4 CLIP2.068308 intron 80 6.1
CLIP2.074962_2 CLIP2.074962 intron 80 6.1
CLIP2.075390_2 CLIP2.075390 intron 80 6.1
CLIP2.075390_3 CLIP2.075390 intron 80 6.1
LMJ.RY0402.041595_1 LMJ.RY0402.041595 CDS 95 5.5
LMJ.RY0402.041595_2 LMJ.RY0402.041595 CDS 95 5.5
LMJ.RY0402.041695_1 LMJ.RY0402.041695 5'UTR_intron 95 5.5
LMJ.RY0402.041695_2 LMJ.RY0402.041695 5'UTR_intron 95 5.5
LMJ.RY0402.045102_1 LMJ.RY0402.045102 3'UTR 73 5.5
LMJ.RY0402.048642_1 LMJ.RY0402.048642 3'UTR|outside_mRNA 95 5.5
LMJ.RY0402.049765_1 LMJ.RY0402.049765 CDS 95 5.5
LMJ.RY0402.049765_2 LMJ.RY0402.049765 CDS 95 5.5
LMJ.RY0402.056787_1 LMJ.RY0402.056787 5'UTR_intron 95 5.5
LMJ.RY0402.056787_2 LMJ.RY0402.056787 CDS 95 5.5
LMJ.RY0402.059602_3 LMJ.RY0402.059602 5'UTR 95 5.5
LMJ.RY0402.059602_4 LMJ.RY0402.059602 5'UTR 95 5.5
LMJ.RY0402.062341_1 LMJ.RY0402.062341 intron 95 5.5
LMJ.RY0402.062341_2 LMJ.RY0402.062341 intron 95 5.5
LMJ.RY0402.064983_1 LMJ.RY0402.064983 5'UTR_intron 95 5.5
LMJ.RY0402.064983_2 LMJ.RY0402.064983 5'UTR_intron 95 5.5
LMJ.RY0402.076721_2 LMJ.RY0402.076721 5'UTR 73 5.5
LMJ.RY0402.082197_1 LMJ.RY0402.082197 5'UTR_intron 95 5.5
LMJ.RY0402.082197_2 LMJ.RY0402.082197 5'UTR_intron 95 5.5
LMJ.RY0402.095232_1 LMJ.RY0402.095232 5'UTR_intron 73 5.5
LMJ.RY0402.096544_2 LMJ.RY0402.096544 intron 95 5.5
LMJ.RY0402.096544_3 LMJ.RY0402.096544 CDS 95 5.5
LMJ.RY0402.103999_2 LMJ.RY0402.103999 5'UTR_intron 73 5.5
LMJ.RY0402.105616_1 LMJ.RY0402.105616 intron 95 5.5
LMJ.RY0402.105616_2 LMJ.RY0402.105616 3'UTR 95 5.5
LMJ.RY0402.112048_1 LMJ.RY0402.112048 5'UTR_intron 95 5.5
LMJ.RY0402.112048_2 LMJ.RY0402.112048 5'UTR_intron 95 5.5
LMJ.RY0402.112275_3 LMJ.RY0402.112275 3'UTR 95 5.5
LMJ.RY0402.112275_4 LMJ.RY0402.112275 3'UTR|outside_mRNA 95 5.5
LMJ.RY0402.133761_1 LMJ.RY0402.133761 3'UTR|outside_mRNA 95 5.5
LMJ.RY0402.133761_2 LMJ.RY0402.133761 3'UTR|outside_mRNA 95 5.5
LMJ.RY0402.138231_2 LMJ.RY0402.138231 5'UTR 95 5.5
LMJ.RY0402.142911_5 LMJ.RY0402.142911 intron 73 5.5
LMJ.RY0402.145208_1 LMJ.RY0402.145208 intron 95 5.5
LMJ.RY0402.145208_2 LMJ.RY0402.145208 intron 95 5.5
LMJ.RY0402.147082_1 LMJ.RY0402.147082 3'UTR|outside_mRNA 95 5.5
LMJ.RY0402.147082_2 LMJ.RY0402.147082 3'UTR|outside_mRNA 95 5.5
LMJ.RY0402.147403_1 LMJ.RY0402.147403 intron 58 5.5
LMJ.RY0402.159249_1 LMJ.RY0402.159249 CDS 95 5.5
LMJ.RY0402.159249_2 LMJ.RY0402.159249 CDS 95 5.5
LMJ.RY0402.159249_3 LMJ.RY0402.159249 CDS 95 5.5
LMJ.RY0402.168344_2 LMJ.RY0402.168344 CDS 73 5.5
LMJ.RY0402.174467_1 LMJ.RY0402.174467 5'UTR 95 5.5
LMJ.RY0402.174467_2 LMJ.RY0402.174467 5'UTR 95 5.5
LMJ.RY0402.174689_1 LMJ.RY0402.174689 5'UTR_intron 95 5.5
LMJ.RY0402.174689_2 LMJ.RY0402.174689 5'UTR_intron 95 5.5
LMJ.RY0402.175237_1 LMJ.RY0402.175237 CDS 58 5.5
LMJ.RY0402.177396_2 LMJ.RY0402.177396 intron 73 5.5
LMJ.RY0402.180543_2 LMJ.RY0402.180543 5'UTR_intron 73 5.5
LMJ.RY0402.184725_3 LMJ.RY0402.184725 5'UTR_intron 73 5.5
LMJ.RY0402.191680_3 LMJ.RY0402.191680 intron 95 5.5
LMJ.RY0402.191680_4 LMJ.RY0402.191680 intron 95 5.5
LMJ.RY0402.212523_1 LMJ.RY0402.212523 intron 95 5.5
LMJ.RY0402.212523_2 LMJ.RY0402.212523 intron 95 5.5
LMJ.RY0402.216986_2 LMJ.RY0402.216986 3'UTR 73 5.5
LMJ.RY0402.218220_2 LMJ.RY0402.218220 3'UTR 73 5.5
LMJ.RY0402.234693_1 LMJ.RY0402.234693 CDS 58 5.5
LMJ.RY0402.235208_1 LMJ.RY0402.235208 5'UTR_intron 73 5.5
LMJ.RY0402.237401_3 LMJ.RY0402.237401 intron 73 5.5
LMJ.RY0402.256161_2 LMJ.RY0402.256161 intron 95 5.5
LMJ.RY0402.256161_3 LMJ.RY0402.256161 intron 95 5.5
LMJ.RY0402.256393_1 LMJ.RY0402.256393 5'UTR_intron 73 5.5
LMJ.RY0402.256662_1 LMJ.RY0402.256662 3'UTR|outside_mRNA 95 5.5
LMJ.RY0402.256662_2 LMJ.RY0402.256662 3'UTR|outside_mRNA 95 5.5
LMJ.SG0182.008946_1 LMJ.SG0182.008946 MULTIPLE_SPLICE_VARIANTS 75 5.3
LMJ.SG0182.019024_1 LMJ.SG0182.019024 MULTIPLE_SPLICE_VARIANTS 75 5.3
LMJ.SG0182.019413_1 LMJ.SG0182.019413 MULTIPLE_SPLICE_VARIANTS 75 5.3
LMJ.SG0182.019628_1 LMJ.SG0182.019628 MULTIPLE_SPLICE_VARIANTS 75 5.3

Gene Annotations

PFAM:
PANTHER:
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 3 of 6 ( 80% confidence (FDR = 0.2))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.