Insertion junction: CLIP2.049002_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049002
Chromosome:chromosome 13
Location:2514399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580000 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTTCAAAGATTGACTGGTCGCCGAAAGACGAACGGGTGCGGAGTAGGC
Internal bar code:ACGCCTTTTCTAGTGGATTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2353
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTACAGCATCCTTCGCG
Suggested primer 2:CACAAGGCCAAGTTCACAGC