Insertion junction: CLIP2.019934_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019934
Chromosome:chromosome 13
Location:2514441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580000 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCTATTGTATACCCCTGAGCGTTGAGAGGCTGGCGCCCTGGGTTCCG
Internal bar code:GAGGCGCATGCAGGGTTCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2563
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAGGCCAAGTTCACAGC
Suggested primer 2:CGTTTACAGCATCCTTCGCG