Insertion junction: CLIP2.036606_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036606
Chromosome:chromosome 13
Location:2514705
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580000 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCACCTTCATATCAGCAGCCTTGCCCTCTCGTTGGACGTCCTCTTTGC
Internal bar code:TCTACTAAATGCTGTTCCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2680
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGGGGGAAAGGAGGACG
Suggested primer 2:CGTTTACAGCATCCTTCGCG