Insertion junction: CLIP2.049002_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049002
Chromosome:chromosome 13
Location:2514412
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580000 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCTATAGCCATCGCCCGCGCCCGTAACCTGTCTATTGTATACCCCTGA
Internal bar code:ACGCCTTTTCTAGTGGATTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1940
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAGGCCAAGTTCACAGC
Suggested primer 2:CGTTTACAGCATCCTTCGCG