Insertion junction: CLIP2.068308_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068308
Chromosome:chromosome 13
Location:2514824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580000 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCTTTGCGGTCACAGGGCCGTCTCGCTGGCCGGCCTCGCTTCCGTCC
Internal bar code:AGCGGTATTCGCAGGGGACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1350
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGGGGGAAAGGAGGACG
Suggested primer 2:CGTTTACAGCATCCTTCGCG