Insertion junction: LMJ.RY0402.133761_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.133761
Chromosome:chromosome 13
Location:2470046
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g580000 3'UTR|outside_mRNA
Cre13.g580050 (1 of 2) PTHR23074//PTHR23074:SF20 - AAA ATPASE // GH08677P 3'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGCTGGGCATTGCCACAGTACCACAGG
Internal bar code:AGGATAAGTTGTCGGCGGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1036
LEAP-Seq percent confirming:99.2779
LEAP-Seq n confirming:7149
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCTGCTGTCTTCTAGGG
Suggested primer 2:TGGTAAGTCCTGGCAGATCC