Insertion junction: LMJ.RY0402.133761_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.133761
Chromosome:chromosome 13
Location:2470042
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g580000 3'UTR|outside_mRNA
Cre13.g580050 (1 of 2) PTHR23074//PTHR23074:SF20 - AAA ATPASE // GH08677P 3'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAGCACGTTTGCTGCTGCGCTGAGCCT
Internal bar code:ACAAGCACGGTGCTGTAAATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:953
LEAP-Seq percent confirming:99.6783
LEAP-Seq n confirming:4028
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCTGCTGTCTTCTAGGG
Suggested primer 2:TGGTAAGTCCTGGCAGATCC