Insertion junction: CLIP2.019934_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019934
Chromosome:chromosome 13
Location:2514441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580000 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACGGGCGCGGGCGATGGCTATAGACGTCGCGCGCAACTTGCCTTCAA
Internal bar code:GAGGCGCATGCAGGGTTCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2596
LEAP-Seq percent confirming:94.8052
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTACAGCATCCTTCGCG
Suggested primer 2:CACAAGGCCAAGTTCACAGC