Insertion junction: CLIP2.050911_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050911
Chromosome:chromosome 13
Location:2514393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580000 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGGCAAGTTGCGCGCGACGTCTATAGCCATCGCCCGCGCCCGTAACCT
Internal bar code:AAAAACACATTGACACGTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1985
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAGGCCAAGTTCACAGC
Suggested primer 2:TCAAACGTACGCGGCTTAGT