Insertion cassette: | CIB2 |
Side of cassette: | 3' |
Strand: | - |
Strain: | CLIP2.000156 |
Chromosome: | chromosome 16 |
Location: | 3230756 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre16.g665800 | SS4,SSS4 | Soluble starch synthase IV; (1 of 2) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED | 3'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | ATGGTTTCGCCCTCAAACGCACCCCAAAAACGTGGTTCGAGGCGAGGTAC |
Internal bar code: | GTCGGAGATAGAGTGCGACTAA |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 2496 |
LEAP-Seq percent confirming: | 97.3333 |
LEAP-Seq n confirming: | 73 |
LEAP-Seq n nonconfirming: | 2 |
LEAP-Seq n unique pos: | 75 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | TTGGAGAAAAGGACGAGGGC |
Suggested primer 2: | ATAGCCGGGGTCAGTTTGTG |