Gene: Cre16.g665800
Overview
| Common name: | SS4,SSS4 |
| Defline: | Soluble starch synthase IV; (1 of 2) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED |
| Description: | ADP-glucose alpha-1,4 glucane alpha-4-glucanotransferase; catalyses the transfer of the glucosyl moiety of the ADP-glc to the non-reducing end of a pre-existing alpha 1,4 linked chain; (AAC17971) |
| Synonyms: | g16069.t1,SS4,SSS4,Cre16.g665800.t1.1 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g665800 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g665800-Venus-3xFLAG
Imaged strain: CSI_LW08B3
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.000123_5 | CLIP2.000123 | intron | 80 | 6.1 |
| CLIP2.000123_6 | CLIP2.000123 | intron | 80 | 6.1 |
| CLIP2.000156_2 | CLIP2.000156 | 3'UTR | 80 | 6.1 |
| CLIP2.000156_3 | CLIP2.000156 | 3'UTR | 80 | 6.1 |
| CLIP2.000273_1 | CLIP2.000273 | intron | 80 | 6.1 |
| CLIP2.000273_2 | CLIP2.000273 | intron | 80 | 6.1 |
| CLIP2.000557_1 | CLIP2.000557 | intron | 80 | 6.1 |
| CLIP2.000896_1 | CLIP2.000896 | intron | 80 | 6.1 |
| CLIP2.000896_2 | CLIP2.000896 | intron | 80 | 6.1 |
| CLIP2.000941_1 | CLIP2.000941 | 5'UTR | 80 | 6.1 |
| CLIP2.001045_1 | CLIP2.001045 | CDS | 80 | 6.1 |
| LMJ.RY0402.052196_4 | LMJ.RY0402.052196 | intron | 58 | 5.5 |
| LMJ.RY0402.147401_1 | LMJ.RY0402.147401 | CDS | 95 | 5.5 |
| LMJ.RY0402.147401_2 | LMJ.RY0402.147401 | intron | 95 | 5.5 |
| LMJ.RY0402.161054_1 | LMJ.RY0402.161054 | CDS | 73 | 5.5 |
| LMJ.RY0402.182156_1 | LMJ.RY0402.182156 | CDS | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00534, PF08323 |
| PANTHER: | PTHR12526 PTHR12526:SF304 |
| KEGG_ec: | EC:2.4.1.21 |
| KEGG_orthology: | K00703 |
| KOG: | |
| Gene ontology terms:: | GO:0004373 |
| Best arabidopsis TAIR name: | AT4G18240.1 |
| Best arabidopsis TAIR symbol: | ATSS4,SS4,SSIV |
| Best arabidopsis TAIR defline: | starch synthase 4 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.