Insertion cassette: | CIB2 |
Side of cassette: | 3' |
Strand: | - |
Strain: | CLIP2.000896 |
Chromosome: | chromosome 16 |
Location: | 3226300 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre16.g665800 | SS4,SSS4 | Soluble starch synthase IV; (1 of 2) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED | intron |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | GTGCAACCCTTGGCCAGCTAGGGCACGGCACACGTGCCCCATCCCACACA |
Internal bar code: | AATTAGAAGTATACGAGAGGGC |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 5053 |
LEAP-Seq percent confirming: | 100.0 |
LEAP-Seq n confirming: | 59 |
LEAP-Seq n nonconfirming: | 0 |
LEAP-Seq n unique pos: | 59 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | AGGGTAGGCCTGGACTACAG |
Suggested primer 2: | CACAGCTCCTGGCCTACAAA |