Insertion junction: CLIP2.000172_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000172
Chromosome:chromosome 12
Location:2484373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507300 LCI30 (1 of 1) K14842 - ribosome biogenesis protein NSA2 (NSA2); Low-CO2-inducible protein 30 3'UTR
Cre12.g507350 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTGTCCCGCTCTCGTCGACCAGGCCCACAAGCAGGTAGACGATGAGT
Internal bar code:CATTCGCCTTGAAGTTTTATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2212
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTAGGGACGCACAAGGAC
Suggested primer 2:CGGGCTGGTAAAATGCGATG