Insertion junction: CLIP2.000190_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000190
Chromosome:chromosome 13
Location:2289670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578650 CPLD10,NUOAF5,HCF173 (1 of 1) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED; PSII biogenesis protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATCATGAATGTAACCCCTCCTGTCCAACTCCTGCTACCCAACTGCCGC
Internal bar code:TCGCTGAAGGTGGGGTAGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4529
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCGCTCTCCACTGGCTC
Suggested primer 2:ACAACGCGTCTACTCTGCAA