Insertion junction: CLIP2.000222_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000222
Chromosome:chromosome 16
Location:2094828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657550 (1 of 1) PF08553 - VID27 cytoplasmic protein (VID27) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAATATAGAGGATGGGCGCGAACCAGAGCACTGAGGAGGTGCTGGACG
Internal bar code:AATTGACCTTGTATGATGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:755
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTCTCCGTGTCTTTGGC
Suggested primer 2:CTCGGGTCAGGTGTGAACTC