Gene: Cre16.g657550

Overview

Common name:
Defline:(1 of 1) PF08553 - VID27 cytoplasmic protein (VID27)
Description:
Synonyms:g15889.t1
Chromosome:chromosome 16

Protein Localization

A plasmid for expressing Cre16.g657550 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g657550-Venus-3xFLAG

Imaged strain: CSI_LW11F5

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.

Classification(s):

cytosol/cytosol (strong signal)

If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.

VenusChlorophyllBright fieldMerged

Protein-Protein Interactions

Bait ID Bait Name Prey ID Prey Name Reference
Cre03.g151650 SMM7 Cre16.g657550 Mackinder et al. 2017

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.000222_3 CLIP2.000222 5'UTR 80 6.1
CLIP2.000222_4 CLIP2.000222 5'UTR 80 6.1
CLIP2.007902_1 CLIP2.007902 intron 80 6.1
CLIP2.007902_2 CLIP2.007902 intron 80 6.1
CLIP2.009738_3 CLIP2.009738 intron 80 6.1
CLIP2.009738_4 CLIP2.009738 intron 80 6.1
CLIP2.013765_2 CLIP2.013765 intron 80 6.1
CLIP2.015307_1 CLIP2.015307 CDS 80 6.1
CLIP2.015307_2 CLIP2.015307 CDS 80 6.1
CLIP2.020528_1 CLIP2.020528 intron 80 6.1
CLIP2.020528_2 CLIP2.020528 intron 80 6.1
CLIP2.028524_1 CLIP2.028524 intron 80 6.1
CLIP2.028524_2 CLIP2.028524 intron 80 6.1
CLIP2.035028_2 CLIP2.035028 intron 80 6.1
CLIP2.035028_3 CLIP2.035028 intron 80 6.1
CLIP2.039281_1 CLIP2.039281 5'UTR 80 6.1
CLIP2.039281_2 CLIP2.039281 5'UTR 80 6.1
CLIP2.041559_3 CLIP2.041559 CDS 80 6.1
CLIP2.041559_4 CLIP2.041559 CDS 80 6.1
CLIP2.043886_1 CLIP2.043886 intron 80 6.1
CLIP2.043886_2 CLIP2.043886 intron 80 6.1
LMJ.RY0402.045961_1 LMJ.RY0402.045961 intron 95 5.5
LMJ.RY0402.045961_2 LMJ.RY0402.045961 intron 95 5.5
LMJ.RY0402.114197_1 LMJ.RY0402.114197 5'UTR 73 5.5
LMJ.RY0402.116179_2 LMJ.RY0402.116179 gene_edge/mRNA_edge/5'UTR 73 5.5
LMJ.RY0402.212335_1 LMJ.RY0402.212335 3'UTR 95 5.5
LMJ.RY0402.212335_2 LMJ.RY0402.212335 3'UTR 95 5.5
LMJ.RY0402.230906_1 LMJ.RY0402.230906 3'UTR 73 5.5

Gene Annotations

PFAM:PF08553
PANTHER: PTHR31913
KEGG_ec:
KEGG_orthology:
KOG:KOG2395
Gene ontology terms::GO:0005515
Best arabidopsis TAIR name:AT3G19240
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:Vacuolar import/degradation, Vid27-related protein
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.