Insertion junction: CLIP2.041559_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041559
Chromosome:chromosome 16
Location:2094788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657550 (1 of 1) PF08553 - VID27 cytoplasmic protein (VID27) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTCAGTGCTCTGGTTCGCGCCCATCCTCTATATTCGAGATAATGAAC
Internal bar code:TTGAGGGCGACCAATATGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3098
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCTGGGCCTCACTCAAC
Suggested primer 2:TCCTTCTCCGTGTCTTTGGC