Insertion junction: CLIP2.020528_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020528
Chromosome:chromosome 16
Location:2093930
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657550 (1 of 1) PF08553 - VID27 cytoplasmic protein (VID27) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACCACATCGCCGTCGTGCATCCGTACCCCGCATCCGAAGGCCTTTAT
Internal bar code:TATTTCGGACTGCGCCCTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3378
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTTTCTATGACGCGCTG
Suggested primer 2:ACGGCCCAACAACATCATCT