Insertion junction: LMJ.RY0402.116179_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.116179
Chromosome:chromosome 16
Location:2086017
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g657550 (1 of 1) PF08553 - VID27 cytoplasmic protein (VID27) gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGCTTAATAAAACAGCAAGTGTTGAGT
Internal bar code:AACGCGCCCCGAGCTATGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:155
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGTTAGTGCTGGTGATG
Suggested primer 2:TTCTTGCTGAACAGTGTGCC