Insertion junction: CLIP2.035028_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035028
Chromosome:chromosome 16
Location:2094673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657550 (1 of 1) PF08553 - VID27 cytoplasmic protein (VID27) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGTAGGGCATAAACGATTGCCTGTGGGGCCTTCACCCAGCCTTTCCCG
Internal bar code:CTAGAGCGATTATTCTAGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1276
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTCTCCGTGTCTTTGGC
Suggested primer 2:GTACCTGGGCCTCACTCAAC